Incorporating microclimate into species distribution models

International audienceSpecies distribution models (SDMs) have rapidly evolved into one of the most widely used tools to answer a broad range of ecological questions, from the effects of climate change to challenges for species management. Current SDMs and their predictions under anthropogenic climate change are, however, often based on free‐air or synoptic temperature conditions with a coarse resolution, and thus fail to capture apparent temperature (cf. microclimate) experienced by living organisms within their habitats. Yet microclimate operates as soon as a habitat can be characterized by a vertical component (e.g. forests, mountains, or cities) or by horizontal variation in surface cover. The mismatch between how we usually express climate (cf. coarse‐grained free‐air conditions) and the apparent microclimatic conditions that living organisms experience has only recently been acknowledged in SDMs, yet several studies have already made considerable progress in tackling this problem from different angles. In this review, we summarize the currently available methods to obtain meaningful microclimatic data for use in distribution modelling. We discuss the issue of extent and resolution, and propose an integrated framework using a selection of appropriately‐placed sensors in combination with both the detailed measurements of the habitat 3D structure, for example derived from digital elevation models or airborne laser scanning, and the long‐term records of free‐air conditions from weather stations. As such, we can obtain microclimatic data with a relevant spatiotemporal resolution and extent to dynamically model current and future species distributions

The involvement of the phytohormone ethylene in the adaptation of Arabidopsis rosettes to enhanced atmospheric carbon dioxide concentrations

Atmospheric CO2 levels are rising rapidly due to anthropogenic activities. Although plants require CO2 to fuel photosynthesis, the relationship between CO2 and plant growth is complex. In phytotrons elevated CO2 was shown to stimulate growth of Arabidopsis thaliana. In nature, there is, however, a constant variation in temperature, the availability of sunlight, nutrients and water, in addition to biotic stresses. The aim of this study was to explore the impact of elevated CO2 on rosette growth and transcriptome profiles in Arabidopsis plants grown under natural radiation and air temperature. Because of its regulatory function in cell elongation, photosynthesis, stomatal closure and leaf senescence, the importance of ethylene for the response to elevated CO2 was investigated in wild-type plants (Col-0), and in plants with constitutive or reduced ethylene signaling (ctr1-1 and ein2-5, respectively). Rosette area measurements indicated that increased atmospheric CO2 did not increase vegetative growth in any of the genotypes. Moreover, both Col-0 and ein2-5 plants grown at elevated CO2 exhibited an increase in stress responsive gene expression compared to those grown at ambient CO2. A downregulation of photosynthesis and an upregulation of metabolism were, apart from the overrepresentation of stress genes, the most important responses to elevated CO2 in both wild-type and ethylene-insensitive plants. However, whereas in Col-0 starch biosynthesis and turnover were more strongly activated, lipid metabolism was enhanced in ein2-5. Through stomatal closure, sugar and lipid metabolism and leaf senescence, ethylene could be involved in the adaption of Arabidopsis rosettes to elevated CO2

Global maps of soil temperature

Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2 m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km2 resolution for 0–5 and 5–15 cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1-km2 pixels (summarized from 8519 unique temperature sensors) across all the world's major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10°C (mean = 3.0 ± 2.1°C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6 ± 2.3°C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (−0.7 ± 2.3°C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications

Dispersal network heterogeneity promotes species coexistence in hierarchical competitive communities

Understanding the mechanisms of biodiversity maintenance is a fundamental issue in ecology. The possibility that species disperse within the landscape along differing paths presents a relatively unexplored mechanism by which diversity could emerge. By embedding a classical metapopulation model within a network framework, we explore how access to different dispersal networks can promote species coexistence. While it is clear that species with the same demography cannot coexist stably on shared dispersal networks, we find that coexistence is possible on unshared networks, as species can surprisingly form self‐organised clusters of occupied patches with the most connected patches at the core. Furthermore, a unimodal biodiversity response to an increase in species colonisation rates or average patch connectivity emerges in unshared networks. Increasing network size also increases species richness monotonically, producing characteristic species–area curves. This suggests that, in contrast to previous predictions, many more species can co‐occur than the number of limiting resources

Strings with Discrete Target Space

We investigate the field theory of strings having as a target space an arbitrary discrete one-dimensional manifold. The existence of the continuum limit is guaranteed if the target space is a Dynkin diagram of a simply laced Lie algebra or its affine extension. In this case the theory can be mapped onto the theory of strings embedded in the infinite discrete line $\Z$ which is the target space of the SOS model. On the regular lattice this mapping is known as Coulomb gas picture. ... Once the classical background is known, the amplitudes involving propagation of strings can be evaluated by perturbative expansion around the saddle point of the functional integral. For example, the partition function of the noninteracting closed string (toroidal world sheet) is the contribution of the gaussian fluctuations of the string field. The vertices in the corresponding Feynman diagram technique are constructed as the loop amplitudes in a random matrix model with suitably chosen potential.Comment: 65 pages (Sept. 91

Invader presence disrupts the stabilizing effect of species richness in plant community recovery after drought

Abstract Higher biodiversity can stabilize the productivity and functioning of grassland communities when subjected to extreme climatic events. The positive biodiversity–stability relationship emerges via increased resistance and/or recovery to these events. However, invader presence might disrupt this diversity–stability relationship by altering biotic interactions. Investigating such disruptions is important given that invasion by non‐native species and extreme climatic events are expected to increase in the future due to anthropogenic pressure. Here we present one of the first multisite invader × biodiversity × drought manipulation experiment to examine combined effects of biodiversity and invasion on drought resistance and recovery at three semi‐natural grassland sites across Europe. The stability of biomass production to an extreme drought manipulation (100% rainfall reduction; BE: 88 days, BG: 85 days, DE: 76 days) was quantified in field mesocosms with a richness gradient of 1, 3, and 6 species and three invasion treatments (no invader, Lupinus polyphyllus, Senecio inaequidens). Our results suggest that biodiversity stabilized community productivity by increasing the ability of native species to recover from extreme drought events. However, invader presence turned the positive and stabilizing effects of diversity on native species recovery into a neutral relationship. This effect was independent of the two invader's own capacity to recover from an extreme drought event. In summary, we found that invader presence may disrupt how native community interactions lead to stability of ecosystems in response to extreme climatic events. Consequently, the interaction of three global change drivers, climate extremes, diversity decline, and invasive species, may exacerbate their effects on ecosystem functioning

Going up the Andes: patterns and drivers of non-native plant invasions across latitudinal and elevational gradients

The Andes mountain range in South America has a high level of endemism and is a major source of ecosystem services. The Andes is increasingly threatened by anthropogenic disturbances that have allowed the establishment of non-native plants, mainly in the lower elevation areas. However, synergies between climate change and anthropogenic pressure are promoting the spread of non-native plants to higher elevation areas. In this article, we evaluate and identify the main non-native plants invading Andean ecosystems, and assess their taxonomic families, growth forms and distribution patterns. Based on a systematic literature review, we identified the importance of climatic and anthropogenic factors as drivers of non-native species establishment in Andean ecosystems and the main impacts of non-native plants in the Andes. We then identified research gaps across each biogeographic region in the Andes. Finally, we highlight key elements to better tackle the problem of non-native plant invasions in Andean ecosystems, including the need for a systematic monitoring of invasion patterns and spread (e.g. MIREN protocol) and a common policy agenda across international borders for the prevention and management of non-native plants in this highly vulnerable region.Fil: Fuentes Lillo, Eduardo. Universidad de Concepción; Chile. Universiteit Antwerp; BélgicaFil: Lembrechts, Jonas J.. Universiteit Antwerp; BélgicaFil: Barros, Ana Agustina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales. Provincia de Mendoza. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales. Universidad Nacional de Cuyo. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales; ArgentinaFil: Aschero, Valeria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales. Provincia de Mendoza. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales. Universidad Nacional de Cuyo. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales; ArgentinaFil: Bustamante, Ramiro O.. Universidad de Chile; ChileFil: Cavieres, Lohengrin A.. Universidad de Concepción; ChileFil: Clavel, Jan. Universiteit Antwerp; BélgicaFil: Herrera, Ileana. Universidad Espíritu Santo; EcuadorFil: Jiménez, Alejandra. Universidad de Concepción; ChileFil: Tecco, Paula Andrea. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Hulme, Philip E.. Lincoln University.; Nueva ZelandaFil: Nuñez, Martin Andres. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte. Instituto de Investigaciones en Biodiversidad y Medioambiente. Universidad Nacional del Comahue. Centro Regional Universidad Bariloche. Instituto de Investigaciones en Biodiversidad y Medioambiente; ArgentinaFil: Rozzi, Ricardo. University of North Texas; Estados UnidosFil: García, Rafael A.. Universidad de Concepción; ChileFil: Simberloff, Daniel. University of Tennessee; Estados UnidosFil: Nijs, Ivan. Universiteit Antwerp; BélgicaFil: Pauchard, Aníbal. Universidad de Concepción; Chil

Importin-8 Modulates Division of Apical Progenitors, Dendritogenesis and Tangential Migration During Development of Mouse Cortex

The building of the brain is a multistep process that requires the coordinate expression of thousands of genes and an intense nucleocytoplasmic transport of RNA and proteins. This transport is mediated by karyopherins that comprise importins and exportins. Here, we investigated the role of the ß-importin, importin-8 (IPO8) during mouse cerebral corticogenesis as several of its cargoes have been shown to be essential during this process. First, we showed that Ipo8 mRNA is expressed in mouse brain at various embryonic ages with a clear signal in the sub-ventricular/ventricular zone (SVZ/VZ), the cerebral cortical plate (CP) and the ganglionic eminences. We found that acute knockdown of IPO8 in cortical progenitors reduced both their proliferation and cell cycle exit leading to the increase in apical progenitor pool without influencing the number of basal progenitors (BPs). Projection neurons ultimately reached their appropriate cerebral cortical layer, but their dendritogenesis was specifically affected, resulting in neurons with reduced dendrite complexity. IPO8 knockdown also slowed the migration of cortical interneurons. Together, our data demonstrate that IPO8 contribute to the coordination of several critical steps of cerebral cortex development. These results suggest that the impairment of IPO8 function might be associated with some diseases of neuronal migration defects

Effect of TENS on pain in relation to central sensitization in patients with osteoarthritis of the knee: study protocol of a randomized controlled trial

<p>Abstract</p> <p>Background</p> <p>Central sensitization has recently been documented in patients with knee osteoarthritis (OAk). So far, the presence of central sensitization has not been considered as a confounding factor in studies assessing the pain inhibitory effect of tens on osteoarthritis of the knee. The purpose of this study is to explore the pain inhibitory effect of burst tens in OAk patients and to explore the prognostic value of central sensitization on the pain inhibitory effect of tens in OAk patients.</p> <p>Methods</p> <p>Patients with knee pain due to OAk will be recruited through advertisements in local media. Temporal summation, before and after a heterotopic noxious conditioning stimulation, will be measured. In addition, pain on a numeric rating score, WOMAC subscores for pain and function and global perceived effect will be assessed. Patients will be randomly allocated to one of two treatment groups (tens, sham tens). Follow-up measurements will be scheduled after a period of 6 and 12 weeks.</p> <p>Discussion</p> <p>Tens influences pain through the electrical stimulation of low-threshold A-beta cutaneous fibers. The responsiveness of central pain-signaling neurons of centrally sensitized OAk patients may be augmented to the input of these electrical stimuli. This would encompass an adverse therapy effect of tens. To increase treatment effectiveness it might be interesting to identify a subgroup of symptomatic OAk patients, i.e., non-sensitized patients, who are likely to benefit from burst tens.</p> <p>Trial Registration</p> <p>ClinicalTrials.gov: <a href="http://www.clinicaltrials.gov/ct2/show/NCT01390285">NCT01390285</a></p